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Publications from 2015 to 2018

2018

  • Adehin, A., Bolaji, O.O., Maggo, S., Kennedy, M.A. (2018) Genetic polymorphism of CYP2C9 and VKORC1 in the Nigerian population: significance for warfarin therapy in the population. Journal of Thrombosis and Thrombolysis. (in press).
  • Culverhouse, R.C., (93 authors including Kennedy, M.A.), Bierut,L.J. (2018) Collaborative meta-analysis finds no evidence of a strong interaction between stress and 5 HTTLPR genotype contributing to the development of depression. Molec Psychiatry 23, 133–142  doi:10.1038/mp.2017.44
  • Maggo, SDS., Chua, EW.,  Chin, P., Cree, S., Pearson, JF., Doogue, M., Kennedy, MA. (2018). A New Zealand platform to enable genetic analysis of adverse drug reactions. NZ Medical Journal 130, 1466, 1-8.
  • Slow, S., Anderson, T., Biggs, P., Kennedy, M., Murdoch, D., & Cree, S. (2018). Complete Genome Sequence of Legionella sainthelensi Isolated from a Patient with Legionnaires' Disease. Genome Announcements, 6(5), e01588-17. https://doi.org/10.1128/genomeA.01588-17
  • Stevens, A.J., Rucklidge, J.J., Kennedy, M.A. (2017) Epigenetics, nutrition and mental health. Is there a relationship? Nutritional Neuroscience 29, 1-12

2017

  • Stevens, A.J., Rucklidge, J.J., Kennedy, M.A. (2017) Epigenetics, nutrition and mental health. Is there a relationship? Nutritional Neuroscience 29, 1-12
  • de Jong,L., Simone Cree, Vanessa Lattimore, George Wiggins, Amanda Spurdle, kConFab Investigators, Allison Miller, Martin A. Kennedy, Logan C. Walker (2017). Nanopore sequencing of full-length BRCA1 mRNA transcripts reveals co-occurrence of known exon skipping events. Breast Cancer Research 19:127.
  • Kirk KM, Martin FM, Mao A, Parker R, Maguire S, Thornton LM, Zhu G, Kerrie McAloney, Jeremy L. Freeman, Phillipa Hay, Sloane Madden, Christine Morgan, Janice Russell, Susan M. Sawyer, Elizabeth K. Hughes, A. Kate Fairweather-Schmidt, Anthea Fursland, Julie McCormack,  Fiona Wagg, Jennifer Jordan, Martin A. Kennedy, Warren Ward, Tracey D. Wade, Cynthia M. Bulik, and Nicholas G. Martin (2017). The Anorexia Nervosa Genetics Initiative: Study description and sample characteristics of the Australian and New Zealand arm. Australian & New Zealand Journal of Psychiatry 51, 583–594
  • Stevens AJ, Kennedy MA. (2017) Methylated Cytosine Maintains G-Quadruplex Structures during Polymerase Chain Reaction and Contributes to Allelic Dropout. Biochemistry. 56, 3691-3698. doi: 10.1021/acs.biochem.7b00480.
  • Stevens, A. J., & Kennedy, M. A. (2017). Structural analysis of G-quadruplex formation at the human MEST promoter. PLoS ONE, 12 (1), e0169433. doi: 10.1371/journal.pone.0169433
  • Appleby, S, Pearson, J.F, Aitchison, A, Spittlehouse, J.K, Joyce, P.R, Kennedy, M.A (2017) Mean telomere length is not associated with current health status in a 50 year old population sample. American Journal of Human Biology 29(1) doi: 10.1002/ajhb.22906
  • Stevens, A.J., Taylor, M.G., Pearce, F.G., Kennedy, M.A.  (2017) Allelic Drop-Out During Polymerase Chain Reaction due to G-Quadruplex Structures and DNA Methylation Is Widespread at Imprinted Human Loci. G3  Early Online January 30, 2017, doi:10.1534/g3.116.038687
  • Adehin, A.,  Bolaji, O.O., Kennedy, M.A. (2017) Polymorphisms in CYP2C8 and CYP3A5 genes in the Nigerian population. Drug Metabolism and Pharmacokinetics (In Press) [IF=1.8]
  • Stevens, A. J., & Kennedy, M. A. (2017). Structural analysis of G-quadruplex formation at the human MEST promoter. PLoS ONE, 12(1), e0169433. doi: 10.1371/journal.pone.0169433
  • Adehin, A., Bolaji,O.O., Kennedy, M.A., Adeagbo, B.A. (2017) Allele frequencies of thiopurine S-methyltransferase (TPMT) variants in the Nigerian population.  Polish Annals of Medicine. (In Press)
  • Bagshaw, A., Horwood, J., Fergusson, D., Gemmell, N., Kennedy, M. (2017) Microsatellite polymorphisms associated with human behavioural and psychological phenotypes including a gene-environment interaction. BMC Medical Genetics 18:12.

2016

  • Stevens, A., Appleby, S., Kennedy, M. (2016) Many commercial hot-start polymerases demonstrate activity prior to thermal activation. Biotechniques 61, 293-296.
  • Appleby, S, Pearson, J.F, Aitchison, A, Spittlehouse, J.K, Joyce, P.R, Kennedy, M.A (2016) Mean telomere length is not associated with current health status in a 50 year old population sample. American Journal of Human Biology [doi: 10.1002/ajhb.22906, Epub ahead of print]
  • Cree, S.L., Fredericks, R., Miller, A.L., Pearce, F.G., Filichev, V., Fee, C., Kennedy, M.A. (2016). DNA G-quadruplexes show strong interaction with DNA methyl transferases in vitro. FEBS Letters  590, 2870-83.
  • Stevens AJ, Kennedy HL, Kennedy MA. (2016) Fluorescent methods for probing G-quadruplex structure in single and double stranded DNA. Biochemistry 55, 3714-25.
  • Foulds, J.A., Maggo, S., Kennedy, M.A. (2016) Personalised prescribing in psychiatry: has pharmacogenomics delivered on its promise?  Aust NZ J Psychiatry 50, 509-10 [IF=3.4]
  • Chua EW, Cree SL, Ton KNT, Lehnert K, Shepherd P, Helsby N, Kennedy MA (2016) Cross-Comparison of Exome Analysis, Next-Generation Sequencing of Amplicons, and the iPLEX ADME PGx Panel for Pharmacogenomic Profiling. Front. Pharmacol. 7:1. doi: 10.3389/fphar.2016.00001.
  • Maggo, S.D.S, Savage, R.L., Kennedy, M.A. (2016) Impact of new genomic technologies on understanding adverse drug reactions.   Clinical Pharmacokinetics 55, 419-436.

2015

  • Bridgman PG, Finsterer J, Lacey C, Kimber B, Parkin PJ, Miller AL, Kennedy MA. (2015) CTG-repeat expansions in the DMPK gene do not cause takotsubo syndrome. Int J Cardiol. 203:107-108.
  • Maggo, S.D.S, Savage, R.L., Kennedy, M.A. (2015) Impact of new genomic technologies on understanding adverse drug reactions.   Clinical Pharmacokinetics [Epub ahead of print].
  • Morris, RW, Taylor, AE, Fluharty, ME, Bjørngaard, JH, Åsvold, BO, Gabrielsen, ME, Campbell, A, Marioni, R, Kumari, M, Korhonen, T, Männistö, S, Marques-Vidal, P, Kaakinen, M, Cavadino, A, Postmus, I, Husemoen, LLN, Skaaby, T, Ahluwalia, TVS, Treur, JL, Willemsen, G, Dale, C, Wannamethee, SG, Lahti, J, Palotie, A, Räikkönen, K, McConnachie, A, Padmanabhan, S, Wong, A, Dalgård, C, Paternoster, L, Ben-Shlomo, Y, Tyrrell, J, Horwood, J, Fergusson, DM, Kennedy, MA, Nohr, EA, Christiansen, L, Kyvik, KO, Kuh, D, Watt, G, Eriksson, JG, Whincup, PH, Vink, JM, Boomsma, DI, Smith, GD, Lawlor, D, Linneberg, A, Ford, I, Jukema, JW, Power, C, Hyppönen, E, Jarvelin, M-R, Preisig, M, Borodulin, K, Kaprio, J, Kivimaki, M, Smith, BH, Hayward, C, Romundstad, PR, Sørensen, TIA, Munafò, MR & Sattar, N (2015) Heavier smoking may lead to relative increase in waist circumference: evidence for causal relationship from Mendelian randomisation meta-analysis. The CARTA consortium BMJ Open. 5:e008808 doi:10.1136/bmjopen-2015-008808
  • Adkins, D. E., Clark, S. L., Copeland, W. E., Kennedy, M., Conway, K., Angold, A., Maes, H., Liu, Y., Kumar, G., Erkanli, A., Patkar, A. A., Silberg, J., Brown, T. H., Fergusson, D. M., Horwood, L. J., Eaves, L., van den Oord, E. J., Sullivan, P. F., and Costello, E. J. (2015) Genome-Wide Meta-Analysis of Longitudinal Alcohol Consumption Across Youth and Early Adulthood. Twin Res Hum Genet 18, 335-347.
  • Balasubramanian, D., Deng, A. X., Doudney, K., Hampton, M. B., and Kennedy, M. A. (2015) Valproic acid exposure leads to upregulation and increased promoter histone acetylation of sepiapterin reductase in a serotonergic cell line. Neuropharmacology 99, 79-88.
  • Chua, E.W., Miller, A.L., Kennedy, MA. (2015) Choice of PCR microtube can impact on the success of long-range PCRs.  Analytical Biochemistry: Methods in the Biological Sciences 477:115-117.
  • Chua,E.W., Cree, S., Barclay, M.L., Doudney, K., Lehnert, K., Aitchison, A., Kennedy, M.A. (2015) Exome sequencing and array comparative genomic hybridisation analysis of preferential 6-methylmercaptopurine producers. The Pharmacogenomics Journal 15, 414-421.
  • Foulds, J.A., Ton, K., Kennedy, M.A., Adamson, S.J., Mulder, R.T., Sellman, J.D. (2015) OPRM1 genotype and naltrexone treatment outcome in depressed alcohol dependent patients. Pharmacogenetics and Genomics 25, 270-273.
  • Jodczyk, S., Pearson, J.F., Aitchison, A., Miller, A.L., Hampton, M.B., Kennedy, M.A. (2015). Telomere length measurement on the Roche LightCycler® 480 platform. Genetic Testing and Molecular Biomarkers 19 (2) 1-6.
  • Larsen, PD, LR Johnston, A Holley, A La Flamme, L Smyth, EW Chua, MA Kennedy, SA Harding. (2015). Prevalence and significance of CYP2C19*2 and CYP2C19*17 alleles in a New Zealand acute coronary syndrome population. Internal Medicine Journal 45, 537–545.
  • Davis JM, Searles VB, Anderson N, Keeney J, Raznahan A, Horwood LJ, Fergusson DM, Kennedy MA, Giedd J, Sikela JM. (2015). DUF1220 copy number is linearly associated with increased cognitive function as measured by total IQ and mathematical aptitude scores. Human Genetics 134, 67-75.

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